BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026A04LP1|AL428474
(918 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1397 1814 0.0
>3x_Contig1397
Length = 8011
Score = 1814 bits (914), Expect = 0.0
Identities = 916/918 (99%)
Strand = Plus / Minus
Query: 1 gatccaatattgagatcgcatttccaaattatatccaagagtatagtagatgaaaacgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5269 gatccaatattgagatcgcatttccaaattatatccaagagtatagtagatgaaaacgaa 5210
Query: 61 aacactgatggatcaaatacaacaatggtggggaccattgaacgggaattgaacaaattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5209 aacactgatggatcaaatacaacaatggtggggaccattgaacgggaattgaacaaattg 5150
Query: 121 aataagttagatcaagaatttgatcaatttgcacaacaattaaacgtatcaactcaacgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5149 aataagttagatcaagaatttgatcaatttgcacaacaattaaacgtatcaactcaacgg 5090
Query: 181 aaaagatcatcgccgatgcaaaaacagcagcctacatggagacagaagctgatgaaacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5089 aaaagatcatcgccgatgcaaaaacagcagcctacatggagacagaagctgatgaaacaa 5030
Query: 241 ggtatgatgggcgagggttcccccgacgtgacaccaagcaaagtgatgaaatctttatcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5029 ggtatgatgggcgagggttcccccgacgtgacaccaagcaaagtgatgaaatctttatcg 4970
Query: 301 ttcgctgagggtccaccaacgatatggaacgaaccacaagacgtttctatgatgttggat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4969 ttcgctgagggtccaccaacgatatggaacgaaccacaagacgtttctatgatgttggat 4910
Query: 361 gatcccgatccgttgcccatagaaagaaaactaaatacaaccgtcaacaagatcagtacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4909 gatcccgatccgttgcccatagaaagaaaactaaatacaaccgtcaacaagatcagtacc 4850
Query: 421 ccaaacccaaaaccgaagctatcacttacagctactcaattgaagtgataacacaaagat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4849 ccaaacccaaaaccgaagctatcacttacagctactcaattgaagtgataacacaaagat 4790
Query: 481 gggcatgcactatataaaawagaaaacaggtatacaatctcatttattttaatattaatt 540
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 4789 gggcatgcactatataaaaaagaaaacaggtatacaatctcatttattttaatattaatt 4730
Query: 541 gaactagggaacggatataattcgtaccatgccgacaactgagagaaagctatctcagct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4729 gaactagggaacggatataattcgtaccatgccgacaactgagagaaagctatctcagct 4670
Query: 601 ccaattcttccaactggcaaatctgactaattacctattatcacattccgtgggttcagc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4669 ccaattcttccaactggcaaatctgactaattacctattatcacattccgtgggttcagc 4610
Query: 661 cgtactaaatctcgacaatggaattcaaaccgtatacacgatgaaatgagatgccagata 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4609 cgtactaaatctcgacaatggaattcaaaccgtatacacgatgaaatgagatgccagata 4550
Query: 721 cagctttcgtctaccgaactgccagtcctctaccggagcttcagccccaacagcttgtcc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4549 cagctttcgtctaccgaactgccagtcctctaccggagcttcagccccaacagcttgtcc 4490
Query: 781 ctaagtatcagctagtaacagtgtgtaacagtgagtaacaagcaacaggtattgcacctg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4489 ctaagtatcagctagtaacagtgtgtaacagtgagtaacaagcaacaggtattgcacctg 4430
Query: 841 gtgtttccctgtttagtcattcgatgtttaacccactcaccctaagaaaccccgcagcgg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4429 gtgtttccctgtttagtcattcgatgtttaacccactcaccctaagaaaccccgcagcgg 4370
Query: 901 rtgctgacacagaaaaaa 918
|||||||||||||||||
Sbjct: 4369 atgctgacacagaaaaaa 4352
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6293
Number of Sequences: 1807
Number of extensions: 6293
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 918
length of database: 10,358,551
effective HSP length: 16
effective length of query: 902
effective length of database: 10,329,639
effective search space: 9317334378
effective search space used: 9317334378
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)